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SRX032985: Whole Exome sequencing for the 1000 Genomes Project
176 ILLUMINA (Illumina HiSeq 2000) runs: 146.3M spots, 21.1G bases, 11.9Gb downloads

Design: Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection
Submitted by: Broad Institute (BI)
Study: Exome sequencing of (ASW) African ancestry in South West US population
PRJNA59835 • SRP004055 • All experiments • All runs
Samples: pool of 22 samples • Homo sapiens
Library:
Name: Solexa-44770
Instrument: Illumina HiSeq 2000
Strategy: WXS
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Spot descriptor:
1  forward barcode77  reverse

Experiment attributes: (show all 6 attributes...) (hide...)
EXPECTED_BASECALL_TABLE: match_edge="full" max_mismatch="1" min_match="7" r (show full text...)(hide...)
match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_469" member_name="tagged_469_CGCCTTCC" CGCCTTCC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_389" member_name="tagged_389_CCAGCACC" CCAGCACC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_818" member_name="tagged_818_TATCCAGG" TATCCAGG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_657" member_name="tagged_657_GCCTAGCC" GCCTAGCC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_745" member_name="tagged_745_GTCATCTA" GTCATCTA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_320" member_name="tagged_320_CAATAGTC" CAATAGTC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_388" member_name="tagged_388_CCAGAGCT" CCAGAGCT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_426" member_name="tagged_426_CCTATGCC" CCTATGCC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_223" member_name="tagged_223_AGGTTATC" AGGTTATC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_214" member_name="tagged_214_AGGATCTA" AGGATCTA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_579" member_name="tagged_579_GACAGTAA" GACAGTAA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_190" member_name="tagged_190_AGCAATTC" AGCAATTC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_584" member_name="tagged_584_GACCTAAC" GACCTAAC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_866" member_name="tagged_866_TCGCCTTG" TCGCCTTG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_899" member_name="tagged_899_TGCAAGTA" TGCAAGTA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_861" member_name="tagged_861_TCCTTGGT" TCCTTGGT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_583" member_name="tagged_583_GACCGTTG" GACCGTTG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_375" member_name="tagged_375_CATGCTTA" CATGCTTA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_110" member_name="tagged_110_ACAGTTGA" ACAGTTGA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_726" member_name="tagged_726_GGTCCAGA" GGTCCAGA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_151" member_name="tagged_151_ACTAAGAC" ACTAAGAC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_821" member_name="tagged_821_TATCTGCC" TATCTGCC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_163" member_name="tagged_163_ACTGTATC" ACTGTATC
5 BI attributes: (show...)(hide...)
BI GSSR Sample IDs: 65604.0, 65605.0, 65606.0, 65607.0, 65608.0, 65609.0, 65610.0, 65611.0, 65620.0, 65621.0, 65622.0, 65623.0, 65624.0, 65625.0, 65626.0, 65627.0, 65628.0, 65629.0, 65630.0, 65631.0, 65632.0, 65633.0, 65634.0
BI GSSR Sample LSIDs: broadinstitute.org:bsp.prod.sample:1D9UT, broadinstitute.org:bsp.prod.sample:1D9UU, broadinstitute.org:bsp.prod.sample:1D9UV, broadinstitute.org:bsp.prod.sample:1D9UW, broadinstitute.org:bsp.prod.sample:1D9UX, broadinstitute.org:bsp.prod.sample:1D9UY, broadinstitute.org:bsp.prod.sample:1D9UZ, broadinstitute.org:bsp.prod.sample:1D9V1, broadinstitute.org:bsp.prod.sample:1D9VA, broadinstitute.org:bsp.prod.sample:1D9VB, broadinstitute.org:bsp.prod.sample:1D9VC, broadinstitute.org:bsp.prod.sample:1D9VD, broadinstitute.org:bsp.prod.sample:1D9VE, broadinstitute.org:bsp.prod.sample:1D9VF, broadinstitute.org:bsp.prod.sample:1D9VG, broadinstitute.org:bsp.prod.sample:1D9VH, broadinstitute.org:bsp.prod.sample:1D9VI, broadinstitute.org:bsp.prod.sample:1D9VJ, broadinstitute.org:bsp.prod.sample:1D9VK, broadinstitute.org:bsp.prod.sample:1D9VL, broadinstitute.org:bsp.prod.sample:1D9VM, broadinstitute.org:bsp.prod.sample:1D9VN, broadinstitute.org:bsp.prod.sample:1D9VO
BI Project Name: C454
BI Target Set: whole_exome_agilent_1.1_refseq_plus_3_boosters
BI Work Request ID: 23276
Runs: 176 runs, 146.3M spots, 21.1G bases, 11.9Gb
Run# of Spots# of BasesSizePublished
SRR077010760,862109.6M63.6Mb2010-12-09
SRR077011821,930118.4M68.1Mb2010-12-09
SRR077013980,105141.1M82.1Mb2010-12-09
SRR077017825,919118.9M69.2Mb2010-12-09
SRR077023815,030117.4M67.6Mb2010-12-09
SRR077024787,907113.5M66.2Mb2010-12-09
SRR077026838,794120.8M70Mb2010-12-09
SRR077027810,191116.7M67.4Mb2010-12-09
SRR077028762,464109.8M64.3Mb2010-12-09
SRR077030800,599115.3M67.6Mb2010-12-09
SRR077032806,534116.1M67.6Mb2010-12-09
SRR077035887,998127.9M74Mb2010-12-09
SRR077036800,388115.3M66.9Mb2010-12-09
SRR077039892,771128.6M74.6Mb2010-12-09
SRR077042729,093105M61.4Mb2010-12-09
There are 161 omitted runs. See all runs in Run Selector.

#Member# of Spots# of Bases
1SRS003668 : tagged_818_TATCCAGG6.3M912.3M
2SRS003669 : tagged_214_AGGATCTA7.5M1.1G
3SRS003671 : tagged_110_ACAGTTGA6.6M945.9M
4SRS003672 : tagged_388_CCAGAGCT6.7M960.7M
5SRS003674 : tagged_320_CAATAGTC6.7M971.7M
6SRS003676 : tagged_579_GACAGTAA6.1M881M
7SRS003677 : tagged_583_GACCGTTG6M867M
8SRS003678 : tagged_861_TCCTTGGT6.2M889.3M
9SRS003737 : tagged_821_TATCTGCC6.6M953.9M
10SRS003738 : tagged_223_AGGTTATC7.8M1.1G
11SRS003740 : tagged_163_ACTGTATC6.6M952.5M
12SRS003741 : tagged_426_CCTATGCC7.1M1G
13SRS003744 : tagged_745_GTCATCTA6.9M988.2M
14SRS003746 : tagged_584_GACCTAAC6.6M954M
15SRS003747 : tagged_866_TCGCCTTG6M870.3M
16SRS003748 : tagged_899_TGCAAGTA6.2M889.8M
17SRS003749 : tagged_190_AGCAATTC6.7M959.8M
18SRS003751 : tagged_151_ACTAAGAC7.2M1G
19SRS003752 : tagged_375_CATGCTTA6.5M929.1M
20SRS003755 : tagged_469_CGCCTTCC6.9M996.7M
21SRS003756 : tagged_726_GGTCCAGA6.4M919M
22SRS003757 : tagged_657_GCCTAGCC6.6M952.5M
23 : defaultn/an/a

ID:
39929

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